Index

A

accept_timestep() (cideMOD.numerics.time_stepper.BaseTimeStepper method) action() (cideMOD.numerics.triggers.TriggerDetected method) AdaptiveTimeStepper (class in cideMOD.numerics.time_stepper) add() (cideMOD.cell.equations.ProblemEquations method) add_boundary_conditions() (cideMOD.cell.equations.ProblemEquations method) add_global_variable() (cideMOD.cell.warehouse.Warehouse method) add_global_variable_info() (cideMOD.cell.warehouse.Warehouse method) add_global_variables() (cideMOD.main.Problem method) add_internal_variable() (cideMOD.cell.warehouse.Warehouse method) add_internal_variable_info() (cideMOD.cell.warehouse.Warehouse method) add_internal_variables() (cideMOD.main.Problem method) add_step() (cideMOD.simulation_interface.inputs.Cycle method) add_to_results_folder() (in module cideMOD.helpers.miscellaneous)

add_trigger() (cideMOD.simulation_interface.inputs.Cycle method) (cideMOD.simulation_interface.inputs.Input method) advance_problem() (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) allow_mutation (cideMOD.models.model_options.BaseModelOptions.Config attribute) analyze_jacobian() (in module cideMOD.helpers.miscellaneous) (in module cideMOD.numerics.helper) append() (cideMOD.helpers.miscellaneous.ParsedList method) arbitrary_types_allowed (cideMOD.models.model_options.BaseModelOptions.Config attribute) assemble_scalar() (in module cideMOD.numerics.fem_handler) assign() (in module cideMOD.numerics.fem_handler) autosize_eventhandler() (cideMOD.helpers.baseview.BaseView method) available_schemes (cideMOD.numerics.time_scheme.TimeScheme attribute) available_variables (cideMOD.numerics.triggers.Trigger attribute)

B

BaseCellComponent (class in cideMOD.cell.components) BaseCellModel (class in cideMOD.models.base.base_models) BaseCellModelEquations (class in cideMOD.models.base.base_models.equations) BaseCellModelInputs (class in cideMOD.models.base.base_models.inputs) BaseCellModelOutputs (class in cideMOD.models.base.base_models.outputs) BaseCellModelPreprocessing (class in cideMOD.models.base.base_models.preprocessing) BaseComponentParser (class in cideMOD.cell.parser) BaseMesher (class in cideMOD.mesh.base_mesher) BaseModelOptions (class in cideMOD.models.model_options) BaseModelOptions.Config (class in cideMOD.models.model_options) BasePXDModel (class in cideMOD.models.PXD.base_model) BasePXDModelInputs (class in cideMOD.models.PXD.base_model) BasePXDModelPreprocessing (class in cideMOD.models.PXD.base_model) BaseSEIModel (class in cideMOD.models.PXD.degradation.SEI.base_SEI) BaseSEIModelOptions (class in cideMOD.models.PXD.degradation.SEI.base_SEI) BaseTimeStepper (class in cideMOD.numerics.time_stepper) BaseView (class in cideMOD.helpers.baseview) BASIC_PROBLEM_INFO (cideMOD.helpers.logging.VerbosityLevel attribute) BASIC_PROGRESS_INFO (cideMOD.helpers.logging.VerbosityLevel attribute) basic_timestep() (cideMOD.numerics.time_stepper.BaseTimeStepper method) BatteryCell (class in cideMOD.cell.components) block_derivative() (in module cideMOD.numerics.fem_handler) BlockFunction (class in cideMOD.numerics.fem_handler) BlockFunctionSpace (class in cideMOD.numerics.fem_handler) build_cell_components() (cideMOD.models.base.base_models.inputs.BaseCellModelInputs method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) build_db() (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) build_dimensional_analysis() (cideMOD.models.model_handler.ModelHandler method)

build_dimensionless_parameters() (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) build_fs() (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) build_legendre() (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method) (cideMOD.models.particle_models.implicit_coupling.StressEnhancedSpectralModel method) build_mesh() (cideMOD.mesh.base_mesher.DolfinMesher method) (cideMOD.mesh.gmsh_adapter.GmshConverter method) (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) build_reference_parameters() (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) build_weak_formulation() (cideMOD.models.base.base_models.equations.BaseCellModelEquations method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.SGM_basic.equations.ParticleModelSGMEquations method) (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel method) (cideMOD.models.PXD.degradation.SEI.electron_migration.equations.MigrationSEIModelEquations method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations.DiffusionSEIModelEquations method) (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method) build_weak_formulation_stationary() (cideMOD.models.base.base_models.equations.BaseCellModelEquations method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.SGM_basic.equations.ParticleModelSGMEquations method) (cideMOD.models.PXD.degradation.SEI.electron_migration.equations.MigrationSEIModelEquations method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations.DiffusionSEIModelEquations method) (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method) build_weak_formulation_transitory() (cideMOD.models.base.base_models.equations.BaseCellModelEquations method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.SGM_basic.equations.ParticleModelSGMEquations method) (cideMOD.models.PXD.degradation.SEI.electron_migration.equations.MigrationSEIModelEquations method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations.DiffusionSEIModelEquations method) (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method) ButlerVolmer_equation() (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method)

C

c_e_equation() (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) c_s_equation() (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) (cideMOD.models.particle_models.explicit_coupling.StressEnhancedIntercalation method) c_s_r_average() (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method) c_s_surf() (cideMOD.models.base.base_particle_models.StrongCoupledPM method) (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method) calculate_total_lithium() (cideMOD.models.particle_models.SGM_basic.outputs.ParticleModelSGMOutputs method) CellModelList (class in cideMOD.models.model_handler) CellParameter (class in cideMOD.cell.parameters) CellParser (class in cideMOD.cell.parser) check() (cideMOD.cell.equations.ProblemEquations method) (cideMOD.numerics.triggers.Trigger method) check_coeffs() (cideMOD.simulation_interface.error_check.ErrorCheck method) check_electrode_depleted() (cideMOD.simulation_interface.error_check.ErrorCheck method) check_electrode_overloaded() (cideMOD.simulation_interface.error_check.ErrorCheck method) check_electrolyte_depleted() (cideMOD.simulation_interface.error_check.ErrorCheck method) check_globals_memory_size() (cideMOD.cell.warehouse.Warehouse method) check_subdomains() (cideMOD.mesh.base_mesher.BaseMesher method) check_temperatures() (cideMOD.simulation_interface.error_check.ErrorCheck method) cideMOD.cell module cideMOD.cell.components module cideMOD.cell.dimensional_analysis module cideMOD.cell.equations module cideMOD.cell.parameters module cideMOD.cell.parser module cideMOD.cell.variables module cideMOD.cell.warehouse module cideMOD.helpers module cideMOD.helpers.baseview module cideMOD.helpers.logging module cideMOD.helpers.miscellaneous module cideMOD.helpers.plotview module cideMOD.main module cideMOD.mesh module cideMOD.mesh.base_mesher module cideMOD.mesh.gmsh_adapter module cideMOD.mesh.gmsh_generator module cideMOD.models module cideMOD.models.base module cideMOD.models.base.base_models module cideMOD.models.base.base_models.equations module cideMOD.models.base.base_models.inputs module cideMOD.models.base.base_models.outputs module cideMOD.models.base.base_models.preprocessing module cideMOD.models.base.base_particle_models module cideMOD.models.model_handler module cideMOD.models.model_options module cideMOD.models.particle_models module cideMOD.models.particle_models.explicit_coupling module cideMOD.models.particle_models.implicit_coupling module cideMOD.models.particle_models.SGM_basic module cideMOD.models.particle_models.SGM_basic.equations module cideMOD.models.particle_models.SGM_basic.inputs module cideMOD.models.particle_models.SGM_basic.outputs module cideMOD.models.particle_models.SGM_basic.preprocessing module cideMOD.models.PXD module cideMOD.models.PXD.base_model module cideMOD.models.PXD.degradation module cideMOD.models.PXD.degradation.LAM module cideMOD.models.PXD.degradation.SEI module

cideMOD.models.PXD.degradation.SEI.base_SEI module cideMOD.models.PXD.degradation.SEI.electron_migration module cideMOD.models.PXD.degradation.SEI.electron_migration.equations module cideMOD.models.PXD.degradation.SEI.electron_migration.inputs module cideMOD.models.PXD.degradation.SEI.electron_migration.outputs module cideMOD.models.PXD.degradation.SEI.electron_migration.preprocessing module cideMOD.models.PXD.degradation.SEI.solvent_diffusion module cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations module cideMOD.models.PXD.degradation.SEI.solvent_diffusion.inputs module cideMOD.models.PXD.degradation.SEI.solvent_diffusion.outputs module cideMOD.models.PXD.degradation.SEI.solvent_diffusion.preprocessing module cideMOD.models.PXD.electrochemical module cideMOD.models.PXD.electrochemical.equations module cideMOD.models.PXD.electrochemical.inputs module cideMOD.models.PXD.electrochemical.outputs module cideMOD.models.PXD.electrochemical.preprocessing module cideMOD.models.PXD.thermal module cideMOD.models.PXD.thermal.equations module cideMOD.models.PXD.thermal.inputs module cideMOD.models.PXD.thermal.outputs module cideMOD.models.PXD.thermal.preprocessing module cideMOD.numerics module cideMOD.numerics.fem_handler module cideMOD.numerics.helper module cideMOD.numerics.polynomials module cideMOD.numerics.solver module cideMOD.numerics.solver_conf module cideMOD.numerics.time_scheme module cideMOD.numerics.time_stepper module cideMOD.numerics.triggers module cideMOD.simulation_interface module cideMOD.simulation_interface.battery_system module cideMOD.simulation_interface.error_check module cideMOD.simulation_interface.inputs module cideMOD.simulation_interface.utils module clean() (cideMOD.cell.warehouse.Warehouse method) clean_mesh_files() (cideMOD.mesh.gmsh_adapter.GmshConverter method) clean_on_exit (cideMOD.models.model_options.BaseModelOptions attribute) clear() (cideMOD.numerics.fem_handler.BlockFunction method) comm (cideMOD.models.model_options.BaseModelOptions attribute) complete_tag (cideMOD.cell.components.BaseCellComponent property) (cideMOD.cell.parser.BaseComponentParser property) (cideMOD.cell.parser.ElectrodeParser.ActiveMaterialParser property) compute_cell_properties() (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) compute_reference_cell_properties() (cideMOD.models.base.base_models.inputs.BaseCellModelInputs method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) constant_expression() (in module cideMOD.helpers.miscellaneous) ConstantTimeStepper (class in cideMOD.numerics.time_stepper) copy() (cideMOD.helpers.miscellaneous.ParsedList method) (cideMOD.models.model_handler.ModelHandler method) create_1D_mesh() (cideMOD.mesh.gmsh_generator.GmshGenerator method) create_2D_mesh() (cideMOD.mesh.gmsh_generator.GmshGenerator method) create_3D_mesh() (cideMOD.mesh.gmsh_generator.GmshGenerator method) create_3D_mesh_with_tabs() (cideMOD.mesh.gmsh_generator.GmshGenerator method) create_block_function() (cideMOD.numerics.fem_handler.BlockFunctionSpace method) create_snes_solution() (cideMOD.numerics.solver.NonlinearBlockProblem method) create_test_function() (cideMOD.numerics.fem_handler.BlockFunctionSpace method) create_trial_function() (cideMOD.numerics.fem_handler.BlockFunctionSpace method) CSI (class in cideMOD.simulation_interface.battery_system) cur_time() (cideMOD.numerics.time_scheme.TimeScheme method) current_collectors() (cideMOD.mesh.base_mesher.SubdomainGenerator method) CurrentInput (class in cideMOD.simulation_interface.inputs) Cycle (class in cideMOD.simulation_interface.inputs)

D

D_s_exp() (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) DEBUG (cideMOD.helpers.logging.LogLevel attribute) DEFAULTS (class in cideMOD.simulation_interface) delta_growth() (cideMOD.models.PXD.degradation.SEI.electron_migration.equations.MigrationSEIModelEquations method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations.DiffusionSEIModelEquations method) DETAILED_PROGRESS_INFO (cideMOD.helpers.logging.VerbosityLevel attribute) DETAILED_SOLVER_INFO (cideMOD.helpers.logging.VerbosityLevel attribute) df_vector() (cideMOD.numerics.polynomials.Lagrange method) dic (cideMOD.cell.parser.BaseComponentParser property) DiffusionSEIModel (class in cideMOD.models.PXD.degradation.SEI.solvent_diffusion)

DiffusionSEIModelEquations (class in cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations) DiffusionSEIModelInputs (class in cideMOD.models.PXD.degradation.SEI.solvent_diffusion.inputs) DiffusionSEIModelOptions (class in cideMOD.models.PXD.degradation.SEI.solvent_diffusion.inputs) DiffusionSEIModelOutputs (class in cideMOD.models.PXD.degradation.SEI.solvent_diffusion.outputs) DiffusionSEIModelPreprocessing (class in cideMOD.models.PXD.degradation.SEI.solvent_diffusion.preprocessing) DimensionalAnalysis (class in cideMOD.cell.dimensional_analysis) dimensionless (cideMOD.models.model_options.BaseModelOptions attribute) DolfinMesher (class in cideMOD.mesh.base_mesher) dropdown_x_handler() (cideMOD.helpers.plotview.PlotView method) dropdown_y_handler() (cideMOD.helpers.plotview.PlotView method) dt() (cideMOD.numerics.time_scheme.TimeScheme method)

E

ElectrochemicalModel (class in cideMOD.models.PXD.electrochemical) ElectrochemicalModelEquations (class in cideMOD.models.PXD.electrochemical.equations) ElectrochemicalModelInputs (class in cideMOD.models.PXD.electrochemical.inputs) ElectrochemicalModelOptions (class in cideMOD.models.PXD.electrochemical.inputs) ElectrochemicalModelOutputs (class in cideMOD.models.PXD.electrochemical.outputs) ElectrochemicalModelPreprocessing (class in cideMOD.models.PXD.electrochemical.preprocessing) electrode_tag (cideMOD.cell.components.ElectrodeParameters.ActiveMaterialParameters property) (cideMOD.cell.parser.ElectrodeParser.ActiveMaterialParser property) ElectrodeParameters (class in cideMOD.cell.components) ElectrodeParameters.ActiveMaterialParameters (class in cideMOD.cell.components) ElectrodeParser (class in cideMOD.cell.parser) ElectrodeParser.ActiveMaterialParser (class in cideMOD.cell.parser) electrodes() (cideMOD.mesh.base_mesher.SubdomainGenerator method) electrolyte() (cideMOD.mesh.base_mesher.SubdomainGenerator method) electrolyte_ohmic_heat_equation() (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method) ERROR (cideMOD.helpers.logging.LogLevel attribute)

ErrorCheck (class in cideMOD.simulation_interface.error_check) estimate_condition_number() (in module cideMOD.numerics.helper) EVENT (cideMOD.simulation_interface.DEFAULTS attribute) execute() (cideMOD.simulation_interface.inputs.CurrentInput method) (cideMOD.simulation_interface.inputs.Cycle method) (cideMOD.simulation_interface.inputs.Input method) (cideMOD.simulation_interface.inputs.VoltageInput method) execute_step() (in module cideMOD.simulation_interface.inputs) exit() (cideMOD.main.Problem method) explicit_update() (cideMOD.models.base.base_models.equations.BaseCellModelEquations method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.degradation.SEI.electron_migration.equations.MigrationSEIModelEquations method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations.DiffusionSEIModelEquations method) (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) extend() (cideMOD.helpers.miscellaneous.ParsedList method) extra (cideMOD.models.model_options.BaseModelOptions.Config attribute)

F

F() (cideMOD.numerics.solver.NonlinearBlockProblem method) f_vector() (cideMOD.numerics.polynomials.Lagrange method) FEM_order (cideMOD.models.model_options.BaseModelOptions attribute) fields() (cideMOD.models.base.base_particle_models.StrongCoupledPM method) (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method)

figure_standard_layout() (cideMOD.helpers.baseview.BaseView method) format_time() (in module cideMOD.helpers.miscellaneous) function_spaces (cideMOD.numerics.fem_handler.BlockFunctionSpace attribute) functions (cideMOD.numerics.fem_handler.BlockFunction attribute)

G

gamg() (in module cideMOD.numerics.solver_conf) generate_class_name() (in module cideMOD.helpers.miscellaneous) generate_CV_txt() (in module cideMOD.helpers.miscellaneous) generate_function() (cideMOD.mesh.base_mesher.SubdomainMapper method) generate_gmsh_mesh() (cideMOD.mesh.gmsh_adapter.GmshMesher method) generate_mesh_from_template() (cideMOD.mesh.gmsh_generator.GmshGenerator method) generate_vector() (cideMOD.mesh.base_mesher.SubdomainMapper method) get_arrhenius() (cideMOD.cell.parameters.CellParameter method) get_average_c_s() (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) (cideMOD.models.particle_models.explicit_coupling.StressEnhancedIntercalation method) (cideMOD.models.particle_models.implicit_coupling.StressEnhancedSpectralModel method) get_avg() (cideMOD.main.Problem method) get_boundary_conditions() (cideMOD.cell.equations.ProblemEquations method) get_brug() (cideMOD.models.PXD.base_model.BasePXDModelPreprocessing method) get_brug_e() (cideMOD.models.PXD.base_model.BasePXDModelPreprocessing method) get_brug_s() (cideMOD.models.PXD.base_model.BasePXDModelPreprocessing method) get_c_e_avg() (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) get_capacity() (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) get_cell_state() (cideMOD.models.base.base_models.outputs.BaseCellModelOutputs method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) get_component() (cideMOD.cell.components.BaseCellComponent method) (cideMOD.cell.parser.BaseComponentParser method) get_component_gradient() (cideMOD.mesh.base_mesher.BaseMesher method) (cideMOD.mesh.base_mesher.DolfinMesher method) get_current() (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) get_dict() (cideMOD.cell.parser.CellParser method) get_dims() (cideMOD.mesh.base_mesher.BaseMesher method) get_field_data() (cideMOD.mesh.gmsh_adapter.GmshConverter method) (cideMOD.mesh.gmsh_generator.GmshGenerator method) get_global_variable() (cideMOD.cell.warehouse.Warehouse method) (cideMOD.main.Problem method) get_global_variable_fnc() (cideMOD.cell.warehouse.Warehouse method) (cideMOD.main.Problem method) get_global_variable_value() (cideMOD.cell.warehouse.Warehouse method) (cideMOD.main.Problem method) get_i_Li_int_avg() (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) get_i_Li_total_avg() (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) get_L_compact_sei() (cideMOD.models.PXD.degradation.SEI.electron_migration.outputs.MigrationSEIModelOutputs method) get_L_porous_sei() (cideMOD.models.PXD.degradation.SEI.electron_migration.outputs.MigrationSEIModelOutputs method) get_L_sei() (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.outputs.DiffusionSEIModelOutputs method) get_max_temperature() (cideMOD.models.PXD.thermal.outputs.ThermalModelOutputs method) get_measures() (cideMOD.mesh.base_mesher.BaseMesher method) (cideMOD.mesh.gmsh_adapter.GmshConverter method) get_model_options() (in module cideMOD.models.model_options)

get_outputs_info() (cideMOD.models.base.base_models.outputs.BaseCellModelOutputs method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.SGM_basic.outputs.ParticleModelSGMOutputs method) (cideMOD.models.PXD.degradation.SEI.electron_migration.outputs.MigrationSEIModelOutputs method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.outputs.DiffusionSEIModelOutputs method) (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) (cideMOD.models.PXD.thermal.outputs.ThermalModelOutputs method) get_parameter() (cideMOD.cell.parser.BaseComponentParser method) get_phi_e_avg() (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) get_phi_s_avg() (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) get_Q_sei() (cideMOD.models.PXD.degradation.SEI.electron_migration.outputs.MigrationSEIModelOutputs method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.outputs.DiffusionSEIModelOutputs method) get_Q_sei_instant() (cideMOD.models.PXD.degradation.SEI.electron_migration.outputs.MigrationSEIModelOutputs method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.outputs.DiffusionSEIModelOutputs method) get_reference_temperature() (cideMOD.cell.parameters.CellParameter method) get_reference_value() (cideMOD.cell.parameters.CellParameter method) get_restriction() (cideMOD.numerics.fem_handler.BlockFunctionSpace method) get_restrictions() (cideMOD.mesh.base_mesher.BaseMesher method) get_soc_c() (cideMOD.models.particle_models.SGM_basic.outputs.ParticleModelSGMOutputs method) get_solvers_info() (cideMOD.models.base.base_models.equations.BaseCellModelEquations method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.SGM_basic.equations.ParticleModelSGMEquations method) (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel method) (cideMOD.models.PXD.degradation.SEI.electron_migration.equations.MigrationSEIModelEquations method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations.DiffusionSEIModelEquations method) (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method) get_spline() (in module cideMOD.helpers.miscellaneous) get_subdomain_switches() (cideMOD.mesh.base_mesher.SubdomainMapper method) get_subdomains() (cideMOD.mesh.base_mesher.BaseMesher method) get_subdomains_dofs() (cideMOD.mesh.base_mesher.SubdomainMapper method) get_time_filter_error() (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) (cideMOD.numerics.time_stepper.AdaptiveTimeStepper method) get_timestep() (cideMOD.main.Problem method) (cideMOD.numerics.time_scheme.TimeScheme method) get_value() (cideMOD.cell.parameters.CellParameter method) (cideMOD.cell.parser.BaseComponentParser method) (cideMOD.models.particle_models.implicit_coupling.NondimensionalSpectralModel method) (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method) get_voltage() (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) getPolyFromCoeffs() (cideMOD.numerics.polynomials.Lagrange method) globals_txts (cideMOD.models.model_options.BaseModelOptions attribute) GmshConverter (class in cideMOD.mesh.gmsh_adapter) gmshEnvironment() (cideMOD.mesh.gmsh_generator.GmshGenerator method) GmshGenerator (class in cideMOD.mesh.gmsh_generator) GmshMesher (class in cideMOD.mesh.gmsh_adapter)

H

hierarchy (cideMOD.models.base.base_models.BaseCellModel property)

hypre() (in module cideMOD.numerics.solver_conf) hysteresis_property() (in module cideMOD.helpers.miscellaneous)

I

i_n_equation() (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) init_results_folder() (in module cideMOD.helpers.miscellaneous) initial_guess() (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.base.base_particle_models.StrongCoupledPM method) (cideMOD.models.base.base_particle_models.WeakCoupledPM method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method) (cideMOD.models.particle_models.SGM_basic.preprocessing.ParticleModelSGMPreprocessing method) (cideMOD.models.PXD.degradation.SEI.electron_migration.preprocessing.MigrationSEIModelPreprocessing method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.preprocessing.DiffusionSEIModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.models.PXD.thermal.preprocessing.ThermalModelPreprocessing method) INPUT (cideMOD.simulation_interface.DEFAULTS attribute)

Input (class in cideMOD.simulation_interface.inputs) insert() (cideMOD.helpers.miscellaneous.ParsedList method) inside_element_expression() (in module cideMOD.mesh.base_mesher) interpolate() (cideMOD.mesh.base_mesher.SubdomainMapper method) (in module cideMOD.numerics.fem_handler) is_active_model() (cideMOD.models.base.base_models.inputs.BaseCellModelInputs class method) (cideMOD.models.particle_models.SGM_basic.inputs.ParticleModelSGMInputs class method) (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel class method) (cideMOD.models.PXD.degradation.SEI.electron_migration.inputs.MigrationSEIModelInputs class method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.inputs.DiffusionSEIModelInputs class method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs class method) (cideMOD.models.PXD.thermal.inputs.ThermalModelInputs class method) isinstance_dolfinx() (in module cideMOD.numerics.fem_handler) items() (cideMOD.numerics.fem_handler.BlockFunction method)

J

J() (cideMOD.numerics.solver.NonlinearBlockProblem method) j_Li_equation() (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method)

j_SEI() (cideMOD.models.PXD.degradation.SEI.electron_migration.equations.MigrationSEIModelEquations method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations.DiffusionSEIModelEquations method)

L

label (cideMOD.cell.components.BaseCellComponent property) (cideMOD.cell.parser.BaseComponentParser property) Lagrange (class in cideMOD.numerics.polynomials) Li_amount() (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method) line_properties() (cideMOD.helpers.baseview.BaseView method)

linear_timestep() (cideMOD.numerics.time_stepper.AdaptiveTimeStepper method) (cideMOD.numerics.time_stepper.BaseTimeStepper method) (cideMOD.numerics.time_stepper.ConstantTimeStepper method) list_implemented_methods() (cideMOD.numerics.time_scheme.TimeScheme method) log (cideMOD.numerics.solver.NewtonBlockSolver attribute) LogLevel (class in cideMOD.helpers.logging)

M

make_dynamic_parameter() (cideMOD.cell.parameters.CellParameter method) make_mandatory() (cideMOD.cell.parameters.CellParameter method) make_mesh_dependent() (cideMOD.cell.parameters.CellParameter method) make_reference_temperature_mandatory() (cideMOD.cell.parameters.CellParameter method) mark() (in module cideMOD.mesh.base_mesher) mesh_updated() (cideMOD.mesh.gmsh_adapter.GmshConverter method) microscale_update() (cideMOD.models.base.base_particle_models.WeakCoupledPM method) (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) MigrationSEIModel (class in cideMOD.models.PXD.degradation.SEI.electron_migration) MigrationSEIModelEquations (class in cideMOD.models.PXD.degradation.SEI.electron_migration.equations) MigrationSEIModelInputs (class in cideMOD.models.PXD.degradation.SEI.electron_migration.inputs) MigrationSEIModelOutputs (class in cideMOD.models.PXD.degradation.SEI.electron_migration.outputs) MigrationSEIModelPreprocessing (class in cideMOD.models.PXD.degradation.SEI.electron_migration.preprocessing) mode (cideMOD.models.model_options.BaseModelOptions attribute) model (cideMOD.models.model_options.BaseModelOptions attribute) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelOptions attribute) ModelHandler (class in cideMOD.models.model_handler) models_info() (in module cideMOD.models) module cideMOD.cell cideMOD.cell.components cideMOD.cell.dimensional_analysis cideMOD.cell.equations cideMOD.cell.parameters cideMOD.cell.parser cideMOD.cell.variables cideMOD.cell.warehouse cideMOD.helpers cideMOD.helpers.baseview cideMOD.helpers.logging cideMOD.helpers.miscellaneous cideMOD.helpers.plotview cideMOD.main cideMOD.mesh cideMOD.mesh.base_mesher cideMOD.mesh.gmsh_adapter cideMOD.mesh.gmsh_generator cideMOD.models cideMOD.models.base cideMOD.models.base.base_models cideMOD.models.base.base_models.equations cideMOD.models.base.base_models.inputs cideMOD.models.base.base_models.outputs cideMOD.models.base.base_models.preprocessing cideMOD.models.base.base_particle_models cideMOD.models.model_handler cideMOD.models.model_options cideMOD.models.particle_models cideMOD.models.particle_models.explicit_coupling cideMOD.models.particle_models.implicit_coupling cideMOD.models.particle_models.SGM_basic cideMOD.models.particle_models.SGM_basic.equations cideMOD.models.particle_models.SGM_basic.inputs cideMOD.models.particle_models.SGM_basic.outputs cideMOD.models.particle_models.SGM_basic.preprocessing cideMOD.models.PXD cideMOD.models.PXD.base_model cideMOD.models.PXD.degradation cideMOD.models.PXD.degradation.LAM cideMOD.models.PXD.degradation.SEI cideMOD.models.PXD.degradation.SEI.base_SEI cideMOD.models.PXD.degradation.SEI.electron_migration cideMOD.models.PXD.degradation.SEI.electron_migration.equations cideMOD.models.PXD.degradation.SEI.electron_migration.inputs cideMOD.models.PXD.degradation.SEI.electron_migration.outputs cideMOD.models.PXD.degradation.SEI.electron_migration.preprocessing cideMOD.models.PXD.degradation.SEI.solvent_diffusion cideMOD.models.PXD.degradation.SEI.solvent_diffusion.equations cideMOD.models.PXD.degradation.SEI.solvent_diffusion.inputs cideMOD.models.PXD.degradation.SEI.solvent_diffusion.outputs cideMOD.models.PXD.degradation.SEI.solvent_diffusion.preprocessing cideMOD.models.PXD.electrochemical cideMOD.models.PXD.electrochemical.equations cideMOD.models.PXD.electrochemical.inputs cideMOD.models.PXD.electrochemical.outputs cideMOD.models.PXD.electrochemical.preprocessing cideMOD.models.PXD.thermal cideMOD.models.PXD.thermal.equations cideMOD.models.PXD.thermal.inputs cideMOD.models.PXD.thermal.outputs cideMOD.models.PXD.thermal.preprocessing cideMOD.numerics cideMOD.numerics.fem_handler cideMOD.numerics.helper cideMOD.numerics.polynomials cideMOD.numerics.solver cideMOD.numerics.solver_conf cideMOD.numerics.time_scheme cideMOD.numerics.time_stepper cideMOD.numerics.triggers cideMOD.simulation_interface cideMOD.simulation_interface.battery_system cideMOD.simulation_interface.error_check cideMOD.simulation_interface.inputs cideMOD.simulation_interface.utils

mtype (cideMOD.models.base.base_models.BaseCellModel property) mult_logical() (in module cideMOD.mesh.base_mesher)

N

N_x (cideMOD.models.model_options.BaseModelOptions attribute) N_y (cideMOD.models.model_options.BaseModelOptions attribute) N_z (cideMOD.models.model_options.BaseModelOptions attribute) name (cideMOD.cell.components.BaseCellComponent property) (cideMOD.cell.parser.BaseComponentParser property) (cideMOD.models.base.base_models.BaseCellModel property)

near_element_expression() (in module cideMOD.mesh.base_mesher) new_tstep() (cideMOD.numerics.triggers.TriggerSurpassed method) NewtonBlockSolver (class in cideMOD.numerics.solver) NO_INFO (cideMOD.helpers.logging.VerbosityLevel attribute) NondimensionalSpectralModel (class in cideMOD.models.particle_models.implicit_coupling) NonlinearBlockProblem (class in cideMOD.numerics.solver) num_functions() (cideMOD.numerics.time_scheme.TimeScheme method)

O

obj() (cideMOD.numerics.solver.NonlinearBlockProblem method)

open_line_properties() (cideMOD.helpers.baseview.BaseView method) overwrite (cideMOD.models.model_options.BaseModelOptions attribute)

P

parse_active_material_parameters() (cideMOD.models.particle_models.SGM_basic.inputs.ParticleModelSGMInputs method) (cideMOD.models.PXD.base_model.BasePXDModelInputs method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) parse_cell_parameters() (cideMOD.models.PXD.base_model.BasePXDModelInputs method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) (cideMOD.models.PXD.thermal.inputs.ThermalModelInputs method) parse_cell_structure() (cideMOD.models.base.base_models.inputs.BaseCellModelInputs method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) parse_compactSEI_parameters() (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel method) (cideMOD.models.PXD.degradation.SEI.electron_migration.inputs.MigrationSEIModelInputs method) parse_component_parameters() (cideMOD.models.model_handler.ModelHandler method) parse_current_collector_parameters() (cideMOD.models.PXD.base_model.BasePXDModelInputs method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) (cideMOD.models.PXD.thermal.inputs.ThermalModelInputs method) parse_electrode_parameters() (cideMOD.models.PXD.base_model.BasePXDModelInputs method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) (cideMOD.models.PXD.thermal.inputs.ThermalModelInputs method) parse_electrolyte_parameters() (cideMOD.models.PXD.base_model.BasePXDModelInputs method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) (cideMOD.models.PXD.thermal.inputs.ThermalModelInputs method) parse_porousSEI_parameters() (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.inputs.DiffusionSEIModelInputs method) parse_SEI_parameters() (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel method) (cideMOD.models.PXD.degradation.SEI.electron_migration.inputs.MigrationSEIModelInputs method) parse_separator_parameters() (cideMOD.models.PXD.base_model.BasePXDModelInputs method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) (cideMOD.models.PXD.thermal.inputs.ThermalModelInputs method) ParsedList (class in cideMOD.helpers.miscellaneous) parser (cideMOD.cell.components.BaseCellComponent property) particle_coupling (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelOptions attribute) particle_model (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelOptions attribute) particle_order (cideMOD.models.particle_models.SGM_basic.inputs.ParticleModelSGMOptions attribute) ParticleModelSGM (class in cideMOD.models.particle_models.SGM_basic) ParticleModelSGMEquations (class in cideMOD.models.particle_models.SGM_basic.equations) ParticleModelSGMInputs (class in cideMOD.models.particle_models.SGM_basic.inputs)

ParticleModelSGMOptions (class in cideMOD.models.particle_models.SGM_basic.inputs) ParticleModelSGMOutputs (class in cideMOD.models.particle_models.SGM_basic.outputs) ParticleModelSGMPreprocessing (class in cideMOD.models.particle_models.SGM_basic.preprocessing) phi_e_equation() (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) phi_s_bc() (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) phi_s_continuity() (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) phi_s_equation() (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) phi_s_interface() (cideMOD.models.PXD.electrochemical.equations.ElectrochemicalModelEquations method) plot_global_results() (cideMOD.simulation_interface.battery_system.CSI method) plot_jacobian() (in module cideMOD.helpers.miscellaneous) (in module cideMOD.numerics.helper) plot_list_variable() (in module cideMOD.helpers.miscellaneous) plot_mode_handler() (cideMOD.helpers.baseview.BaseView method) plot_ocps() (in module cideMOD.helpers.miscellaneous) plot_ocvs() (in module cideMOD.helpers.miscellaneous) PlotView (class in cideMOD.helpers.plotview) prepare_mesh() (cideMOD.mesh.gmsh_adapter.GmshMesher method) prepare_outputs() (cideMOD.models.base.base_models.outputs.BaseCellModelOutputs method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.SGM_basic.outputs.ParticleModelSGMOutputs method) (cideMOD.models.PXD.degradation.SEI.electron_migration.outputs.MigrationSEIModelOutputs method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.outputs.DiffusionSEIModelOutputs method) (cideMOD.models.PXD.electrochemical.outputs.ElectrochemicalModelOutputs method) (cideMOD.models.PXD.thermal.outputs.ThermalModelOutputs method) prepare_parameters() (cideMOD.mesh.gmsh_adapter.GmshConverter method) print() (cideMOD.cell.equations.ProblemEquations method) (cideMOD.simulation_interface.error_check.ErrorCheck method) print_available_outputs() (cideMOD.main.Problem method) print_available_variables() (cideMOD.numerics.triggers.Trigger class method) print_control_variables_info() (cideMOD.main.Problem method) print_diagonal_statistics() (in module cideMOD.numerics.helper) print_test_plan() (cideMOD.simulation_interface.battery_system.CSI method) Problem (class in cideMOD.main) ProblemEquations (class in cideMOD.cell.equations) ProblemVariables (class in cideMOD.cell.variables) ProblemVariables.StateVariables (class in cideMOD.cell.variables) PROFILE (cideMOD.simulation_interface.DEFAULTS attribute)

Q

q_equation() (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method)

R

raise_errors_on_exit (cideMOD.models.model_options.BaseModelOptions attribute) reaction_irreversible_heat() (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method) reaction_reversible_heat() (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method) read_gmsh() (cideMOD.mesh.gmsh_adapter.GmshConverter method) read_input_data() (in module cideMOD.helpers.miscellaneous) read_param_file() (cideMOD.cell.parser.CellParser method) ref_value (cideMOD.cell.parameters.CellParameter property) refine_ocp() (in module cideMOD.helpers.miscellaneous) register_cell_component() (in module cideMOD.cell) register_model() (in module cideMOD.models) register_model_options() (in module cideMOD.models) register_model_type() (in module cideMOD.models) register_trigger() (in module cideMOD.models) register_variable() (cideMOD.numerics.triggers.Trigger class method) reset() (cideMOD.cell.parameters.CellParameter method) (cideMOD.cell.warehouse.Warehouse method) (cideMOD.main.Problem method) (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.numerics.solver.NewtonBlockSolver method) (cideMOD.numerics.triggers.Trigger method) (cideMOD.simulation_interface.battery_system.CSI method)

reset_snes_solution() (cideMOD.numerics.solver.NewtonBlockSolver method) Rest (class in cideMOD.simulation_interface.inputs) restriction_elements (cideMOD.numerics.fem_handler.BlockFunctionSpace attribute) restrictions (cideMOD.numerics.fem_handler.BlockFunctionSpace attribute) restrictions() (cideMOD.simulation_interface.inputs.Input method) root (cideMOD.models.base.base_models.BaseCellModel property) run_case() (in module cideMOD.simulation_interface.utils) run_test_plan() (cideMOD.simulation_interface.battery_system.CSI method)

S

save_on_exit (cideMOD.models.model_options.BaseModelOptions attribute) save_path (cideMOD.models.model_options.BaseModelOptions attribute) save_plot() (in module cideMOD.helpers.miscellaneous) scale_variable() (cideMOD.cell.dimensional_analysis.DimensionalAnalysis method) (cideMOD.models.model_handler.ModelHandler method) scale_variables() (cideMOD.cell.dimensional_analysis.DimensionalAnalysis method) (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.model_handler.ModelHandler method) SEI_model (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModelOptions attribute) sei_particle_order (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.inputs.DiffusionSEIModelOptions attribute) SEIParameters (class in cideMOD.models.PXD.degradation.SEI.base_SEI) SEIParameters.CompactLayerParameters (class in cideMOD.models.PXD.degradation.SEI.base_SEI) SEIParameters.PorousLayerParameters (class in cideMOD.models.PXD.degradation.SEI.base_SEI) SEIParser (class in cideMOD.models.PXD.degradation.SEI.base_SEI) SEIParser.CompactLayerParser (class in cideMOD.models.PXD.degradation.SEI.base_SEI) SEIParser.PorousLayerParser (class in cideMOD.models.PXD.degradation.SEI.base_SEI) set_active_material_parameters() (cideMOD.models.particle_models.SGM_basic.preprocessing.ParticleModelSGMPreprocessing method) (cideMOD.models.PXD.base_model.BasePXDModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) set_boundaries() (cideMOD.mesh.base_mesher.SubdomainGenerator method) set_boundary() (cideMOD.mesh.base_mesher.SubdomainGenerator method) set_boundary_condition() (cideMOD.main.Problem method) set_cell_parameters() (cideMOD.models.PXD.base_model.BasePXDModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.models.PXD.thermal.preprocessing.ThermalModelPreprocessing method) set_cell_state() (cideMOD.main.Problem method) (cideMOD.models.base.base_models.inputs.BaseCellModelInputs method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelInputs method) set_compactSEI_parameters() (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel method) (cideMOD.models.PXD.degradation.SEI.electron_migration.preprocessing.MigrationSEIModelPreprocessing method) set_component() (cideMOD.cell.parser.BaseComponentParser method) set_component_parameters() (cideMOD.models.model_handler.ModelHandler method) set_current_collector_parameters() (cideMOD.models.PXD.base_model.BasePXDModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.models.PXD.thermal.preprocessing.ThermalModelPreprocessing method) set_delay() (cideMOD.cell.warehouse.Warehouse method) set_dependent_variables() (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.degradation.SEI.electron_migration.preprocessing.MigrationSEIModelPreprocessing method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.preprocessing.DiffusionSEIModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.models.PXD.thermal.preprocessing.ThermalModelPreprocessing method) set_domain() (cideMOD.mesh.base_mesher.SubdomainGenerator method) set_electrode_parameters() (cideMOD.models.PXD.base_model.BasePXDModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.models.PXD.thermal.preprocessing.ThermalModelPreprocessing method) set_electrolyte_parameters() (cideMOD.models.PXD.base_model.BasePXDModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.models.PXD.thermal.preprocessing.ThermalModelPreprocessing method) set_interface() (cideMOD.mesh.base_mesher.SubdomainGenerator method) set_parameter() (cideMOD.cell.parser.BaseComponentParser method) set_parameters() (cideMOD.cell.parser.BaseComponentParser method) set_porousSEI_parameters() (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.preprocessing.DiffusionSEIModelPreprocessing method)

set_problem_variables() (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.SGM_basic.preprocessing.ParticleModelSGMPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.models.PXD.thermal.preprocessing.ThermalModelPreprocessing method) set_SEI_parameters() (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModel method) set_separator_parameters() (cideMOD.models.PXD.base_model.BasePXDModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.models.PXD.thermal.preprocessing.ThermalModelPreprocessing method) set_state_variables() (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.SGM_basic.preprocessing.ParticleModelSGMPreprocessing method) (cideMOD.models.PXD.degradation.SEI.electron_migration.preprocessing.MigrationSEIModelPreprocessing method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.preprocessing.DiffusionSEIModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.models.PXD.thermal.preprocessing.ThermalModelPreprocessing method) set_storing_time() (cideMOD.cell.warehouse.Warehouse method) set_tab() (cideMOD.mesh.base_mesher.SubdomainGenerator method) set_tau() (cideMOD.numerics.time_scheme.TimeScheme method) set_timestep() (cideMOD.main.Problem method) (cideMOD.numerics.time_scheme.TimeScheme method) set_value() (cideMOD.cell.parameters.CellParameter method) setup() (cideMOD.cell.variables.ProblemVariables method) (cideMOD.cell.warehouse.Warehouse method) (cideMOD.main.Problem method) (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.base.base_particle_models.WeakCoupledPM method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) (cideMOD.models.PXD.degradation.SEI.electron_migration.preprocessing.MigrationSEIModelPreprocessing method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.preprocessing.DiffusionSEIModelPreprocessing method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) (cideMOD.simulation_interface.battery_system.CSI method) setup_dynamic_parameter() (cideMOD.cell.parameters.CellParameter method) setup_internal_variable() (cideMOD.cell.warehouse.Warehouse method) simple_poly() (cideMOD.numerics.polynomials.Lagrange method) SIMULATION_OPTIONS (cideMOD.simulation_interface.DEFAULTS attribute) solid_conductor() (cideMOD.mesh.base_mesher.SubdomainGenerator method) solid_ohmic_heat_equation() (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method) solve() (cideMOD.main.Problem method) (cideMOD.models.particle_models.explicit_coupling.StandardParticleIntercalation method) (cideMOD.numerics.solver.NewtonBlockSolver method) solve_LAM (cideMOD.models.model_options.BaseModelOptions attribute) solve_thermal (cideMOD.models.PXD.thermal.inputs.ThermalModelOptions attribute) SolverCrashed SpectralLegendreModel (class in cideMOD.models.particle_models.implicit_coupling) StandardParticleIntercalation (class in cideMOD.models.particle_models.explicit_coupling) start_record() (cideMOD.numerics.triggers.Trigger method) store() (cideMOD.cell.warehouse.Warehouse method) StressEnhancedIntercalation (class in cideMOD.models.particle_models.explicit_coupling) StressEnhancedSpectralModel (class in cideMOD.models.particle_models.implicit_coupling) StrongCoupledPM (class in cideMOD.models.base.base_particle_models) SubdomainGenerator (class in cideMOD.mesh.base_mesher) SubdomainMapper (class in cideMOD.mesh.base_mesher)

T

T_equation() (cideMOD.models.PXD.thermal.equations.ThermalModelEquations method) tag (cideMOD.cell.components.BaseCellComponent property) (cideMOD.cell.parser.BaseComponentParser property) TEST_PLAN (cideMOD.simulation_interface.DEFAULTS attribute) ThermalModel (class in cideMOD.models.PXD.thermal) ThermalModelEquations (class in cideMOD.models.PXD.thermal.equations) ThermalModelInputs (class in cideMOD.models.PXD.thermal.inputs) ThermalModelOptions (class in cideMOD.models.PXD.thermal.inputs) ThermalModelOutputs (class in cideMOD.models.PXD.thermal.outputs) ThermalModelPreprocessing (class in cideMOD.models.PXD.thermal.preprocessing) theta() (cideMOD.models.particle_models.explicit_coupling.StressEnhancedIntercalation method) (cideMOD.models.particle_models.implicit_coupling.StressEnhancedSpectralModel method)

time_scheme (cideMOD.models.base.base_models.BaseCellModel property) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelOptions attribute) TimeScheme (class in cideMOD.numerics.time_scheme) timestep() (cideMOD.numerics.time_stepper.AdaptiveTimeStepper method) (cideMOD.numerics.time_stepper.BaseTimeStepper method) (cideMOD.numerics.time_stepper.ConstantTimeStepper method) total_size() (in module cideMOD.cell.warehouse) Trigger (class in cideMOD.numerics.triggers) TriggerDetected TriggerSurpassed tstep_implicit() (cideMOD.numerics.time_stepper.BaseTimeStepper method)

U

unscale_variable() (cideMOD.cell.dimensional_analysis.DimensionalAnalysis method) (cideMOD.models.model_handler.ModelHandler method) unscale_variables() (cideMOD.cell.dimensional_analysis.DimensionalAnalysis method) (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.model_handler.ModelHandler method) update() (cideMOD.cell.equations.ProblemEquations method) (cideMOD.cell.parameters.CellParameter method) update_color() (cideMOD.helpers.baseview.BaseView method) update_control_variables() (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) update_dynamic_parameters() (cideMOD.main.Problem method) update_functions() (cideMOD.models.base.base_particle_models.StrongCoupledPM method) update_height() (cideMOD.helpers.baseview.BaseView method)

update_parameter() (cideMOD.cell.parser.CellParser method) update_parameters() (cideMOD.cell.parser.CellParser method) update_reference_values() (cideMOD.models.base.base_models.preprocessing.BaseCellModelPreprocessing method) (cideMOD.models.model_handler.ModelHandler method) (cideMOD.models.PXD.electrochemical.preprocessing.ElectrochemicalModelPreprocessing method) update_save_path() (cideMOD.main.Problem method) update_solutions() (cideMOD.numerics.solver.NonlinearBlockProblem method) update_test_plan() (cideMOD.simulation_interface.battery_system.CSI method) update_time_step() (cideMOD.numerics.time_scheme.TimeScheme method) update_title() (cideMOD.helpers.baseview.BaseView method) update_width() (cideMOD.helpers.baseview.BaseView method) update_xlabel() (cideMOD.helpers.baseview.BaseView method) update_ylabel() (cideMOD.helpers.baseview.BaseView method) user_value (cideMOD.cell.parameters.CellParameter property)

V

validate_comm() (cideMOD.models.model_options.BaseModelOptions class method) validate_FEM_order() (cideMOD.models.model_options.BaseModelOptions class method) validate_mode() (cideMOD.models.model_options.BaseModelOptions class method) validate_model() (cideMOD.models.model_options.BaseModelOptions class method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelOptions class method) validate_particle_coupling() (cideMOD.models.PXD.degradation.SEI.base_SEI.BaseSEIModelOptions class method) (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelOptions class method) validate_particle_model() (cideMOD.models.PXD.electrochemical.inputs.ElectrochemicalModelOptions class method) validate_particle_order() (cideMOD.models.particle_models.SGM_basic.inputs.ParticleModelSGMOptions class method) (cideMOD.models.PXD.degradation.SEI.solvent_diffusion.inputs.DiffusionSEIModelOptions class method)

validate_solve_LAM() (cideMOD.models.model_options.BaseModelOptions class method) validate_verbose() (cideMOD.models.model_options.BaseModelOptions class method) value (cideMOD.cell.parameters.CellParameter property) var_names (cideMOD.numerics.fem_handler.BlockFunction attribute) (cideMOD.numerics.fem_handler.BlockFunctionSpace attribute) variables (cideMOD.numerics.triggers.Trigger attribute) verbose (cideMOD.models.model_options.BaseModelOptions attribute) VerbosityLevel (class in cideMOD.helpers.logging) VoltageInput (class in cideMOD.simulation_interface.inputs)

W

Warehouse (class in cideMOD.cell.warehouse) WARNING (cideMOD.helpers.logging.LogLevel attribute) WeakCoupledPM (class in cideMOD.models.base.base_particle_models) wf_0() (cideMOD.models.base.base_particle_models.StrongCoupledPM method) (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method) wf_explicit_coupling() (cideMOD.models.base.base_particle_models.StrongCoupledPM method) (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method)

wf_implicit_coupling() (cideMOD.models.base.base_particle_models.StrongCoupledPM method) (cideMOD.models.particle_models.implicit_coupling.NondimensionalSpectralModel method) (cideMOD.models.particle_models.implicit_coupling.SpectralLegendreModel method) (cideMOD.models.particle_models.implicit_coupling.StressEnhancedSpectralModel method) write_globals() (cideMOD.cell.warehouse.Warehouse method) write_gmsh_file() (cideMOD.mesh.gmsh_generator.GmshGenerator method) write_param_file() (cideMOD.cell.parser.CellParser method) write_to_dolfinx() (cideMOD.mesh.gmsh_generator.GmshGenerator method)

X

xdf_vector() (cideMOD.numerics.polynomials.Lagrange method)

xf_vector() (cideMOD.numerics.polynomials.Lagrange method)